Sponge-associated microorganisms: evolution, ecology, and biotechnological potential

MW Taylor, R Radax, D Steger… - … and molecular biology …, 2007 - Am Soc Microbiol
… -based surveys for amoA indicated that archaeal ammonia oxidizers are widespread in
marine sponges (D. Steger et al., unpublished data). Whether archaea or bacteria are the key …

PPARγ and C/EBP factors orchestrate adipocyte biology via adjacent binding on a genome-wide scale

MI Lefterova, Y Zhang, DJ Steger… - Genes & …, 2008 - genesdev.cshlp.org
… Cells were grown in differentiation medium for 3 d, followed by 2 d in growth medium with
insulin, followed by growth medium only. 293T cells were grown in high-glucose DMEM (…

DOT1L/KMT4 recruitment and H3K79 methylation are ubiquitously coupled with gene transcription in mammalian cells

DJ Steger, MI Lefterova, L Ying… - … and cellular biology, 2008 - Taylor & Francis
The histone H3 lysine 79 methyltransferase DOT1L/KMT4 can promote an oncogenic
pattern of gene expression through binding with several MLL fusion partners found in acute …

[HTML][HTML] A subset of TAFIIs are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation

PA Grant, D Schieltz, MG Pray-Grant, DJ Steger… - Cell, 1998 - cell.com
A number of transcriptional coactivator proteins have been identified as histone
acetyltransferase (HAT) proteins, providing a direct molecular basis for the coupling of histone …

Transcriptional activators direct histone acetyltransferase complexes to nucleosomes

RT Utley, K Ikeda, PA Grant, J Côté, DJ Steger… - Nature, 1998 - nature.com
d, Transcription was assayed with nucleosomal templates as in a, including or omitting
acetyl CoA as indicated. SAGA or NuA4 stimulation of VP16-mediated transcription required …

Regulation of chromatin remodeling by inositol polyphosphates

DJ Steger, ES Haswell, AL Miller, SR Wente… - Science, 2003 - science.org
… (D) Northern analysis ofpho81Δ pho80 ts strains with the relevant genotypes indicated.
PHO5 and PHO84 mRNA amounts in the plc1, arg82, ipk1, andkcs1 mutants were 6% and 77%, …

Remodeling chromatin structures for transcription: what happens to the histones?

DJ Steger, JL Workman - Bioessays, 1996 - Wiley Online Library
Activation of gene transcription in vivo is accompanied by an alteration of chromatin structure.
The specific binding of transcriptional activators disrupts nucleosomal arrays, suggesting …

Histone deacetylase 3 is an epigenomic brake in macrophage alternative activation

…, D Feng, DJ Steger, J Schug, D Artis… - Genes & …, 2011 - genesdev.cshlp.org
… (C,D) Gene expression determined by qPCR after pretreatment with TSA in wild-type
macrophages (C) and HDAC3 knockout macrophages (D). (E) Gene expression determined by …

Discrete functions of nuclear receptor Rev-erbα couple metabolism to the clock

…, JR Remsberg, J Jager, RE Soccio, DJ Steger… - Science, 2015 - science.org
… (D) RORα binding at clock and control genes promoters at ZT10, in WT, Rev-erbα KO (αKO),
Rev-erbβ knockdown (βKD), and αKO/βKD mice liver, analyzed by ChIP-PCR. Data are …

Chromatin decouples promoter threshold from dynamic range

FH Lam, DJ Steger, EK O'Shea - Nature, 2008 - nature.com
Chromatin influences gene expression by restricting access of DNA binding proteins to their
cognate sites in the genome 1 , 2 , 3 . Large-scale characterization of nucleosome …